Q&A
> Error: homebrew-core is a shallow clone.To brew update, first run:
その次の行に書かれてる
git -C...
を実行する必要があるみたいです
https://gotohayato.com/content/528/
現在のPythonのバージョンが2.7.16であり、homebrewを使用して最新のバージョン3.9.5にインストールしようとしていますが、エラーがでてインストールできない状態となっています。
何が原因なのかわからず、この状態からどうすれば正常に実行できるでしょうか。
ご教授お願いいたします。
The default interactive shell is now zsh.
To update your account to use zsh, please run chsh -s /bin/zsh.
For more details, please visit https://support.apple.com/kb/HT208050.
MacBook-Pro:~ kotaosu$ brew -v
Homebrew 3.1.9-64-geeef3f4
Homebrew/homebrew-core (git revision c12eadc; last commit 2017-09-09)
Homebrew/homebrew-cask (git revision 6ce1a529aa; last commit 2021-05-30)
MacBook-Pro:~ kotaosu$ brew install pyenv
Error:
homebrew-core is a shallow clone.
To brew update, first run:
git -C /usr/local/Homebrew/Library/Taps/homebrew/homebrew-core fetch --unshallow
This command may take a few minutes to run due to the large size of the repository.
This restriction has been made on GitHub's request because updating shallow
clones is an extremely expensive operation due to the tree layout and traffic of
Homebrew/homebrew-core and Homebrew/homebrew-cask. We don't do this for you
automatically to avoid repeatedly performing an expensive unshallow operation in
CI systems (which should instead be fixed to not use shallow clones). Sorry for
the inconvenience!
Warning: Calling cellar in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 with a cellar: argument instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/pyenv.rb:10
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/pyenv.rb:11
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/pyenv.rb:12
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/pyenv.rb:13
Warning: Calling cellar in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 with a cellar: argument instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/autoconf.rb:9
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/autoconf.rb:11
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/autoconf.rb:12
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/autoconf.rb:13
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/autoconf.rb:14
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/autoconf.rb:15
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/pkg-config.rb:9
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/pkg-config.rb:10
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/pkg-config.rb:11
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/openssl.rb:13
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/openssl.rb:14
Warning: Calling sha256 "digest" => :tag in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 tag: "digest" instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/openssl.rb:15
Warning: Calling cellar in a bottle block is deprecated! Use brew style --fix on the formula to update the style or use sha256 with a cellar: argument instead.
Please report this issue to the homebrew/core tap (not Homebrew/brew or Homebrew/core), or even better, submit a PR to fix it:
/usr/local/Homebrew/Library/Taps/homebrew/homebrew-core/Formula/makedepend.rb:8
Error: readline: undefined method `undent' for #String:0x00007fdf863a0d78
MacBook-Pro:~ kotaosu$
brew update を先にすればいいんじゃないですかね？
回答1件
0
ベストアンサー
こんばんは。
問題文読ませていただきました。
brew updateするために、git -C /usr/local/Homebrew/Library/Taps/homebrew/homebrew-core fetch --unshallowを実行してほしいみたいですね。
エラー文の中では以下の部分になります。ご確認のほど、よろしくお願いいたします。????♂️
To brew update, first run:
git -C /usr/local/Homebrew/Library/Taps/homebrew/homebrew-core fetch --unshallow
This command may take a few minutes to run due to the large size of the repository.
This restriction has been made on GitHub's request because updating shallow
clones is an extremely expensive operation due to the tree layout and traffic of
Homebrew/homebrew-core and Homebrew/homebrew-cask. We don't do this for you
automatically to avoid repeatedly performing an expensive unshallow operation in
CI systems (which should instead be fixed to not use shallow clones). Sorry for
the inconvenience!
投稿2021/05/30 10:56
退会済みユーザー
総合スコア0
回答のほうを読ませていただきました。
少し先に進むことはできました！しかし、まだ解決には至っていません。
現在自分と同じ状態になって解決した人の情報を集めています。
以下のURLが非常に私と近い状態なのですが、~/.bash_profileを編集しても未だにバージョンに変化はありません。
https://qiita.com/TheHiro/ite
以下により詳細な内容を記載します。
./bash_profileの中身
# Setting PATH for Python 3.9
# The original version is saved in .bash_profile.pysave
export PATH
# Setting PATH for Python 3.9
# The original version is saved in .bash_profile.pysave
export PATH
export PYENV_ROOT="$HOME/.pyenv"
export PATH="$PYENV_ROOT/bin:$PATH"
eval "$(pyenv init -)"
各実行内容
MacBook-Pro:~ kotaosu$ pyenv init
# (The below instructions are intended for common
# shell setups. See the README for more guidance
# if they don't apply and/or don't work for you.)
# Add pyenv executable to PATH and
# enable shims by adding the following
# to ~/.profile:
export PYENV_ROOT="$HOME/.pyenv"
export PATH="$PYENV_ROOT/bin:$PATH"
eval "$(pyenv init --path)"
# If your ~/.profile sources ~/.bashrc,
# the lines need to be inserted before the part
# that does that. See the README for another option.
# If you have ~/.bash_profile, make sure that it
# also executes the above lines -- e.g. by
# copying them there or by sourcing ~/.profile
# Load pyenv into the shell by adding
# the following to ~/.bashrc:
eval "$(pyenv init -)"
# Make sure to restart your entire logon session
# for changes to profile files to take effect.
source ~/.bash_profile
WARNING: `pyenv init -` no longer sets PATH.
Run `pyenv init` to see the necessary changes to make to your configuration.\
MacBook-Pro:~ kotaosu$ python --version
Python 2.7.16
MacBook-Pro:~ kotaosu$ pyenv versions
system
* 3.9.5 (set by /Users/kotaosu/.python-version)
Mac OSのバージョン情報を質問文に追記した方がいいでしょう。Mac OSはMojaveまでデフォルトのシェルはbash、Catalina以降はzshになっています。何かしらのサイトを参考にされているかもしれませんが、MojaveまでとCatalina以降は方法が変わりますので、参考にされる際はその点を注意してください。質問文の冒頭で"The default interactive shell is now zsh."となっているので、それが正しければbash_profileを書き換えても何も起きないと思います。
ご指摘ありがとうございます。
Mac OS はBig Sur11.4です。
シェルについてですが、変更しながら試していたため、このような伝え方になってしまいました。
申し訳ありません。
zshでもbashでもデフォルトのシェルを変更して試しましたが、解決には至りませんでした・・・
なるほど、そういう事情は分からなかったので、ぜひ質問文に分かりやすいように追記されるといいと思います。
pyenvのバージョンは3.9.5に切り替わっているようなので、あとは eval "$(pyenv init -)" が効いてないってことなんですかね？ ためしに eval "$(pyenv init -)" を手打ちしてから python --version としたらどうなりますか？ そんな感じで切り分けていくしか無さそうです。
お、少し進んでよかったです。
うーん、echo $SHELL を利用して現在使われているシェルの確認をお願いいたします。(https://www.itmedia.co.jp/help/tips/linux/l0358.html)
次に以下の記事が丁寧にpyenvについてまとめられていますので、ご確認いただけますでしょうか？????♂️
https://qiita.com/crankcube/items/15f06b32ec56736fc43a
現在使用しているシェルはzshです。
２つめのURLを参照しながら、進めたところ、2番目のコマンド$makeでターゲットが指定されておらずmakefileが見つからないと表示されました。
次にHomebrewを先日インストールしていたので、問題がないか確認するため＄brew doctorを実行したところ、以下の結果が表示されました。
kotaosu@MacBook-Pro ~ % brew doctor
Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry or file an issue; just ignore this. Thanks!
Warning: You have the following deprecated, cask taps tapped:
caskroom/cask
Untap them with `brew untap`.
Warning: "config" scripts exist outside your system or Homebrew directories.
`./configure` scripts often look for *-config scripts to determine if
software packages are installed, and which additional flags to use when
compiling and linking.
Having additional scripts in your path can confuse software installed via
Homebrew if the config script overrides a system or Homebrew-provided
script of the same name. We found the following "config" scripts:
/Library/Frameworks/Python.framework/Versions/3.8/bin/python3-config
/Library/Frameworks/Python.framework/Versions/3.8/bin/python3.8-config
Warning: Broken symlinks were found. Remove them with `brew cleanup`:
/usr/local/bin/apm
/usr/local/bin/atom
/usr/local/share/man/man1/brew-cask.1
/usr/local/share/zsh/site-functions/_brew_cask
なるほど、brew doctorでwarningが出ているのはよくありませんが、一旦無視しましょう。
記事の続きでbrew updateから続けるとどのようになりますでしょうか？
brew updateを実行しました。表示された結果を読むとアップデートされたみたいです。
kotaosu@MacBook-Pro ~ % brew update
==> Homebrew is run entirely by unpaid volunteers. Please consider donating:
https://github.com/Homebrew/brew#donations
Updated Homebrew from eeef3f4fe to f9dd12ef5.
Updated 3 taps (homebrew/core, homebrew/cask and caskroom/cask).
==> New Formulae
code-minimap principalmapper pywhat simde
==> Updated Formulae
alsa-lib detekt libxfixes pmd
apache-arrow dialog liquidprompt pnpm
apache-arrow-glib dua-cli logtalk pspg
black gallery-dl micronaut redpen
bowtie2 gnumeric mingw-w64 rest-shell
bpytop goreleaser mrboom ringojs
cglm igraph net-snmp swagger-codegen
clojure imagemagick@6 netlify-cli swagger2markup-cli
collectd janet opa terraform-docs
commandbox kahip openjdk trojan-go
contentful-cli ki pandoc
dafny ktlint pdm
dependency-check libxdg-basedir pipx
==> Updated Casks
adobe-creative-cloud mps
adobe-creative-cloud nextcloud
appcode nextcloud
appcode onyx
betterzip onyx
betterzip opencore-configurator
bisq opencore-configurator
bisq owncloud
chromium owncloud
chromium perforce
clion perforce
clion phpstorm
cmake phpstorm
cmake postico
coconutbattery postico
coconutbattery progressive-downloader
datagrip progressive-downloader
datagrip pycharm
datweatherdoe pycharm
datweatherdoe pycharm-ce
dbeaver-community pycharm-ce
dbeaver-community pycharm-edu
deepl pycharm-edu
deepl pycharm-with-anaconda-plugin
displays pycharm-with-anaconda-plugin
displays quickhash
eul quickhash
eul rider
gas-mask rider
gas-mask rubymine
goland rubymine
goland sejda-pdf
google-backup-and-sync sejda-pdf
google-backup-and-sync session-manager-plugin
hstracker session-manager-plugin
hstracker sketchup
igdm sketchup
igdm stats
imazing stats
imazing switchhosts
intellij-idea switchhosts
intellij-idea teamviewer
intellij-idea-ce teamviewer
intellij-idea-ce termius
jameica termius
jameica ui-browser
jetbrains-space ui-browser
jetbrains-space utm
jetbrains-toolbox utm
jetbrains-toolbox videofusion
katalon-studio videofusion
katalon-studio webex
logseq webex
logseq webstorm
lunar webstorm
lunar xmind-zen
lyricsx xmind-zen
lyricsx yinxiangbiji
miniforge yinxiangbiji
miniforge youtrack-workflow
mochi youtrack-workflow
mochi youtube-downloader
mps youtube-downloader
==> Deleted Casks
appstudio hex resxtreme
appstudio hex resxtreme
auristor-client iograph rss
auristor-client iograph rss
cricut-design-space itrash wraparound
cricut-design-space itrash wraparound
filedrop opera-mail
filedrop opera-mail
==> Homebrew was updated to version 3.1.9
The changelog can be found at:
https://github.com/Homebrew/brew/releases/tag/3.1.9
お、いい感じですね。
記事に従って、brew update以降も試してみてください。上手くいきそうです〜
記事の手順に従って実行したところ、zshprofileが存在しないと表示されました・・・
kotaosu@MacBook-Pro ~ % brew install pyenv
Warning: pyenv 2.0.0 is already installed and up-to-date.
To reinstall 2.0.0, run:
brew reinstall pyenv
kotaosu@MacBook-Pro ~ % open ~/.zshprofile
The file /Users/kotaosu/.zshprofile does not exist.
ターミナルを開く。
vi ~/.zprofile を実行。(vimを開く。vimについて : https://knowledge.sakura.ad.jp/21687/)
vimにてi(insertモード)を押し、記事のように、zshprofileファイル内へコードを転記。
vimを終了するために、:wq(コードを保存して終了)を実行。
ターミナルにて exit を実行してターミナルを閉じる。
でお願いいたします。????♂️
zprofile zshrcをviコマンドで編集し、手順に沿って実行しましたが、最終的にpythonのバージョンは2.7.16のままでした・・・
新しいpythonは別のパスにあるのかもしれない・・・????
kotaosu@MacBook-Pro ~ % vi ~/.zprofile
kotaosu@MacBook-Pro ~ % vi ~/.zshrc
kotaosu@MacBook-Pro ~ % vi ~/.zshrc
kotaosu@MacBook-Pro ~ % pyenv --help
Usage: pyenv <command> [<args>]
Some useful pyenv commands are:
--version Display the version of pyenv
commands List all available pyenv commands
exec Run an executable with the selected Python version
global Set or show the global Python version(s)
help Display help for a command
hooks List hook scripts for a given pyenv command
init Configure the shell environment for pyenv
install Install a Python version using python-build
local Set or show the local application-specific Python version(s)
prefix Display prefix for a Python version
rehash Rehash pyenv shims (run this after installing executables)
root Display the root directory where versions and shims are kept
shell Set or show the shell-specific Python version
shims List existing pyenv shims
uninstall Uninstall a specific Python version
version Show the current Python version(s) and its origin
version-file Detect the file that sets the current pyenv version
version-name Show the current Python version
version-origin Explain how the current Python version is set
versions List all Python versions available to pyenv
whence List all Python versions that contain the given executable
which Display the full path to an executable
See `pyenv help <command>' for information on a specific command.
For full documentation, see: https://github.com/pyenv/pyenv#readme
kotaosu@MacBook-Pro ~ % pyenv install --list
Available versions:
〜一覧が表示されていたため省略〜
kotaosu@MacBook-Pro ~ % pyenv install --list | egrep '^[ ]+[3].[89.]+$'
3.8.8
3.8.9
kotaosu@MacBook-Pro ~ % pyenv install --list | egrep '^[ ]+[3].[0-9.]+$' | grep ' 3.8' | tail -n 1
3.8.9
3.8.10
zsh: command not found: 3.8.9
kotaosu@MacBook-Pro ~ % pyenv install 3.8.10
python-build: use openssl@1.1 from homebrew
python-build: use readline from homebrew
Downloading Python-3.8.10.tar.xz...
-> https://www.python.org/ftp/python/3.8.10/Python-3.8.10.tar.xz
Installing Python-3.8.10...
python-build: use readline from homebrew
python-build: use zlib from xcode sdk
Installed Python-3.8.10 to /Users/kotaosu/.pyenv/versions/3.8.10
kotaosu@MacBook-Pro ~ % pyenv --versions
pyenv: no such command `--versions'
kotaosu@MacBook-Pro ~ % pyenv -V
pyenv: no such command `-V'
kotaosu@MacBook-Pro ~ % pyenv global 3.9.5
kotaosu@MacBook-Pro ~ % pyenv versions
system
3.8.10
* 3.9.5 (set by /Users/kotaosu/.python-version)
kotaosu@MacBook-Pro ~ % python --versions
Unknown option: --
usage: /System/Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python [option] ... [-c cmd | -m mod | file | -] [arg] ...
Try `python -h' for more information.
kotaosu@MacBook-Pro ~ % python --version
Python 2.7.16
~/.zshprofile, ~/.zshrcへ記事に記載の内容は貼り付け、保存した認識で問題ありませんか？
~/.zprofile, ~/.zshrcのそれぞれの編集後の中身を以下に記載します。
~/.zprofile
# Setting PATH for Python 3.8
# The original version is saved in .zprofile.pysave
PATH="/Library/Frameworks/Python.framework/Versions/3.8/bin:${PATH}"
export PATH
# set PIPENV behaviour to always place .venv inside the project
export PIPENV_VENV_IN_PROJECT=true
if [ `uname` = "Darwin" ]; then
# set op homebrew
if [ -e /opt/homebrew ]; then
HOMEBREW_ROOT=/opt/homebrew
else
HOMEBREW_ROOT=/usr/local
fi
export HOMEBREW_ROOT
eval $(${HOMEBREW_ROOT}/bin/brew shellenv)
# set up pyenv
export PYENV_ROOT=${HOMEBREW_ROOT}/var/pyenv
if command -v pyenv 1>/dev/null 2>&1; then
"~/.zprofile" 28L, 682B
~/.zshrc
if [ `uname` = "Darwin" ]; then
if command -v pyenv 1>/dev/null 2>&1; then
eval "$(pyenv init -)"
fi
fi
２つめの返答を確認しました。
pythonコマンドが見ている先のパスを確認するとusr/bin/pythonとなっていました。
パスを変更するにはどうしたらよろしいでしょうか。
＞ ~/.zshprofile, ~/.zshrcのそれぞれの
.zprofile です。
technocore様
大変申し訳ありません。
記載した内容が間違っていました。
~/.zshprofileを~/.zprofileに修正しました。
eval "$(pyenv init -)" して
which python するとパスが変わりませんか〜？
eval "$(pyenv init -)"を実行した時、パスを設定できないようです。
WARNING: `pyenv init -` no longer sets PATH.
Run `pyenv init` to see the necessary changes to make to your configuration.
kotaosu@MacBook-Pro ~ % eval "$(pyenv init -)"
WARNING: `pyenv init -` no longer sets PATH.
Run `pyenv init` to see the necessary changes to make to your configuration.
kotaosu@MacBook-Pro ~ % eval "$(pyenv init -)"
WARNING: `pyenv init -` no longer sets PATH.
Run `pyenv init` to see the necessary changes to make to your configuration.
なるほど。。
・vim ~/.zshrc を実行。
・.zshrcの内容を全て削除する。
・こちらの記事の「素の pyenv を利用している場合」の内容へ書き換える。(https://zenn.dev/antyuntyun/articles/pyenv_warning_resolve )
・内容を保存する。
・ターミナルを再起動する。
・python --version を実行する。
でお願いいたします。????♂️
URLが４０４で閲覧できないようです・・・
失礼しました。再度参照ください。
pythonのバージョンが・・・とうとう3.9.5になりました！！！
長い間私の質問にお付き合いいただきありがとうございました！！
おー、うまくいってよかった！！
諦めずに最後までナイストライです！！
いえいえ。
また困ったこととかありましたら、気軽にご相談ください。
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