質問編集履歴
1
コードの説明とテキストファイルの内容、エラーメッセージを追記
test
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File without changes
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test
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@@ -112,7 +112,7 @@
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print('intronの数は？')
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intron_kazu = int(input())
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intron_kazu = int(input()) #intron個数
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@@ -134,21 +134,165 @@
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intron_number = int(input())
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intron_number = int(input()) #intronの残基番号を入力
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list_intron.append(intron_number)
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index = array_number.index(intron_number)
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index = array_number.index(intron_number) #intorn分子の最初の通しナンバー
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-
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count = array_number.count(intron_number)
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count = array_number.count(intron_number) #intron分子を構成する原子数
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-
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intron_finish = index + count
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intron_finish = index + count #(intron原子の最後の通しナンバー + 1)
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```
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元のテキストファイルがこちらになります
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> ATOM 1 N ALA A 9 -10.745 32.779 -2.046 1.00 61.24 N
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158
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159
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ANISOU 1 N ALA A 9 7527 8194 7549 2491 121 -1211 N
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160
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161
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ATOM 2 CA ALA A 9 -9.707 33.771 -2.328 1.00 60.43 C
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162
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163
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ANISOU 2 CA ALA A 9 7556 8106 7300 2484 202 -1169 C
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164
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165
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ATOM 3 C ALA A 9 -8.532 33.739 -1.303 1.00 61.21 C
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166
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167
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ANISOU 3 C ALA A 9 7589 8327 7340 2293 284 -1015 C
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168
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169
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ATOM 4 O ALA A 9 -8.683 33.287 -0.159 1.00 57.06 O
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170
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171
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ANISOU 4 O ALA A 9 6940 7894 6849 2153 299 -972 O
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ATOM 5 CB ALA A 9 -10.311 35.169 -2.384 1.00 61.35 C
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174
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175
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ANISOU 5 CB ALA A 9 7779 8192 7338 2507 226 -1295 C
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ATOM 6 N TYR A 10 -7.370 34.249 -1.756 1.00 58.26 N
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ANISOU 6 N TYR A 10 7304 7947 6887 2302 335 -930 N
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180
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ATOM 7 CA TYR A 10 -6.099 34.359 -1.034 1.00 58.08 C
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ANISOU 7 CA TYR A 10 7243 8003 6822 2150 400 -787 C
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184
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ATOM 8 C TYR A 10 -6.143 35.449 0.019 1.00 67.00 C
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186
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ANISOU 8 C TYR A 10 8380 9178 7900 2016 432 -811 C
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ATOM 9 O TYR A 10 -5.993 35.148 1.206 1.00 66.49 O
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ANISOU 9 O TYR A 10 8226 9198 7839 1881 443 -770 O
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ATOM 10 CB TYR A 10 -4.965 34.694 -2.018 1.00 57.22 C
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ANISOU 10 CB TYR A 10 7222 7854 6665 2231 444 -687 C
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ATOM 11 CG TYR A 10 -4.674 33.623 -3.042 1.00 55.74 C
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ANISOU 11 CG TYR A 10 7039 7641 6497 2392 410 -644 C
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ATOM 12 CD1 TYR A 10 -5.589 33.329 -4.050 1.00 57.18 C
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ANISOU 12 CD1 TYR A 10 7290 7737 6700 2599 335 -758 C
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そしてスキップ処理してPython に表示されたのがこちらです。
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> > ATOM 1 N ALA A 9 -10.745 32.779 -2.046 1.00 61.24 N
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ATOM 2 CA ALA A 9 -9.707 33.771 -2.328 1.00 60.43 C
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ATOM 3 C ALA A 9 -8.532 33.739 -1.303 1.00 61.21 C
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ATOM 4 O ALA A 9 -8.683 33.287 -0.159 1.00 57.06 O
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ATOM 5 CB ALA A 9 -10.311 35.169 -2.384 1.00 61.35 C
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ATOM 6 N TYR A 10 -7.370 34.249 -1.756 1.00 58.26 N
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ATOM 7 CA TYR A 10 -6.099 34.359 -1.034 1.00 58.08 C
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ATOM 8 C TYR A 10 -6.143 35.449 0.019 1.00 67.00 C
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ATOM 9 O TYR A 10 -5.993 35.148 1.206 1.00 66.49 O
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ATOM 10 CB TYR A 10 -4.965 34.694 -2.018 1.00 57.22 C
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ATOM 11 CG TYR A 10 -4.674 33.623 -3.042 1.00 55.74 C
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ATOM 12 CD1 TYR A 10 -5.589 33.329 -4.050 1.00 57.18 C
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ATOM 13 CD2 TYR A 10 -3.436 32.994 -3.083 1.00 54.91 C
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ATOM 14 CE1 TYR A 10 -5.317 32.361 -5.013 1.00 53.48 C
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ATOM 15 CE2 TYR A 10 -3.147 32.033 -4.048 1.00 54.87 C
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ATOM 16 CZ TYR A 10 -4.096 31.713 -5.006 1.00 55.01 C
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ATOM 17 OH TYR A 10 -3.855 30.748 -5.947 1.00 42.22 O
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ATOM 18 N ALA A 11 -6.341 36.729 -0.438 1.00 66.89 N
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ATOM 19 CA ALA A 11 -6.371 38.001 0.307 1.00 67.92 C
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ATOM 20 C ALA A 11 -7.005 37.876 1.678 1.00 72.70 C
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ATOM 21 O ALA A 11 -6.570 38.550 2.621 1.00 74.55 O
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ATOM 22 CB ALA A 11 -7.114 39.055 -0.498 1.00 69.00 C
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ATOM 23 N GLN A 12 -8.038 37.023 1.784 1.00 67.03 N
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ATOM 24 CA GLN A 12 -8.740 36.734 3.030 1.00 66.02 C
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ATOM 25 C GLN A 12 -7.944 35.739 3.897 1.00 64.78 C
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ATOM 26 O GLN A 12 -7.729 35.980 5.091 1.00 65.92 O
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ATOM 27 CB GLN A 12 -10.134 36.167 2.718 1.00 67.75 C
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ATOM 28 N GLU A 13 -7.503 34.627 3.286 1.00 56.75 N
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ATOM 29 CA GLU A 13 -6.809 33.555 3.988 1.00 53.08 C
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ATOM 30 C GLU A 13 -5.357 33.865 4.378 1.00 45.98 C
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ATOM 31 O GLU A 13 -4.805 33.048 5.098 1.00 43.30 O
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ATOM 32 CB GLU A 13 -6.860 32.263 3.161 1.00 54.87 C
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ATOM 33 N LYS A 14 -4.742 35.018 3.973 1.00 38.34 N
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ATOM 34 CA ALYS A 14 -3.341 35.298 4.317 0.50 37.05 C
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・
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・
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（約3000行）
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エラーメッセージがこちらです。
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> Traceback (most recent call last):
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File "C:\Users\sakura\Desktop\python 1031\1行飛ばしテスト.py", line 70, in <module>
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index = array_number.index(intron_number) #intorn分子の最初の通しナンバー
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ValueError: 47 is not in list
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@@ -158,7 +302,7 @@
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```Python
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file = open('test.txt','r')
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file = open('test2.txt','r') #ファイルを変えるときはここを変える
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string = file.readline()
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@@ -172,13 +316,13 @@
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z = [0]*10000
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array_number = [0]*10000
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array_number = [0]*10000 #配列番号
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tag = [0]*10000
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tag = [0]*10000 #物質名
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atom = [0]*10000
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atom = [0]*10000 #原子名
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chain = [0]*10000
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chain = [0]*10000 #鎖
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@@ -228,7 +372,7 @@
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print('intronの数は？')
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intron_kazu = int(input())
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intron_kazu = int(input()) #intron個数
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@@ -238,7 +382,7 @@
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z_intron = []*(intron_kazu)
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list_intron = []
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list_intron = [] #intronの通しナンバー
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@@ -250,16 +394,20 @@
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intron_number = int(input())
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intron_number = int(input()) #intronの残基番号を入力
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254
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255
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list_intron.append(intron_number)
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index = array_number.index(intron_number)
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index = array_number.index(intron_number) #intorn分子の最初の通しナンバー
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count = array_number.count(intron_number)
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405
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count = array_number.count(intron_number) #intron分子を構成する原子数
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262
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-
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406
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263
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intron_finish = index + count
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407
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intron_finish = index + count #(intron原子の最後の通しナンバー + 1)
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```
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